Jumbo Content

People

James Sullivan
James Sullivan
Email | Website
Harbor Branch Oceanographic Institute of Florida Atlantic University

ROSES Proposal

Improving IOP Measurement Uncertainties for PACE Ocean Color Remote Sensing Applications (2013)

Science Meeting Presentations (8)

Assessing the Impact of a Variable Seawater Depolarization Ratio on IOP Retrievals
Moore, T., Sullivan, J., and Twardowski, M. (16-Jan-18)
Improving IOP Measurement Uncertainties for PACE Ocean Color Remote Sensing Applications
Sullivan, J., Twardowski, M., Moore, T., McKee, D., Röttgers, R., and Stockley, N. (16-Jan-18). Click here to view this presentation with audio.
Improving IOP Measurement Uncertainties for PACE Ocean Color Remote Sensing Applications
Sullivan, J., Twardowski, M., Moore, T., McKee, D., Röttgers, R., and Stockley, N. (17-Jan-17). Click here to view this presentation with audio.
Improving Retrieval of IOPs from Ocean Color Remote Sensing Through Explicit Consideration of the Volume Scattering Function
Twardowski, M., Sullivan, J., Tonizzo, A., Stockley, N., Freeman, S., and Slivkoff, M. (17-Jan-17). Click here to view this presentation with audio.
Improving IOP Measurement Uncertainties for PACE Ocean Color Remote Sensing Applications
Sullivan, J. (21-Jan-16)
Improving Retrieval of IOPs from Ocean Color Remote Sensing Through Explicit Consideration of the Volume Scattering Function
Twardowski, M., Sullivan, J., Tonizzo, A., Stockley, N., Freeman, S., and Slivkoff, M. (21-Jan-16)
Improving IOP Measurement Uncertainties for PACE Ocean Color Remote Sensing Applications
Sullivan, J., Twardoswski, M. and Moore, T. (14-Jan-15)
Improving Retrieval of IOPs from Ocean Color Remote Sensing Through Explicit Consideration of the VSF
Twardowski, M. and Sullivan, J. (14-Jan-15)

Publications (32)

Werdell, P.J., McKinna, L.I.W., Boss, E., Ackleson, S.G., Craig, S.E., Gregg, W.W., Lee, Z., Maritorena, S., Roesler, C.S., Rousseaux, C.S., Stramski, D., Sullivan, J.M., Twardowski, M., Tzortziou, M., and Zhang, X. (2018). An Overview of Approaches and Challenges for Retrieving Marine Inherent Optical Properties from Ocean Color Remote Sensing, Prog. Oceanogr., 160, 186-212, doi:10.1016/j.pocean.2018.01.001.
Sun, B., Kattawar, G.W., Yang, P., Twardowski, M.S., and Sullivan, J.M. (2016). Simulation of the Scattering Properties of a Chain-forming Triangular Prism Oceanic Diatom, J. Quant. Spectrosc. Ra., 178, 390-399, doi: 10.1016/j.jqsrt.2016.02.035.
Twardowski, M., Sullivan, J. and Dalgleish, F. (2016). Studying Undisturbed Particle Fields in the Ocean Novel Instrument Suite for More Representative Particle Measurements, Sea Technol, 57(2), 15-19.
Gu, Y., Carrizo, C., Gilerson, A.A., Parrish C. Brady, P.D., Cummings, M.E., Twardowski, M.S., Sullivan, J.M., Ibrahim, A.I., and Kattawar, G.W. (2016). Polarimetric Imaging and Retrieval of Target Polarization Characteristics in Underwater Environment, Appl. Opt., 55(3), 626-637, doi: 10.1364/AO.55.000626.
Brady, P., Gilerson, A., Kattawar, G., Sullivan, J., Twardowski, M., Dierssen, H., Gao, M., Travis, K., Etheredge, R.I., Tonizzo, A., Ibrahim, A., Carrizo, C., Gu, Y., Russell, B., Mislinski, K., Zhao, S., Tonizzo, A., and Cummings, M. (2015). Open-Ocean Fish Reveal an Omnidirectional Solution to Camouflage in Polarized Environments, Science, 350(6263), 965-969, doi: 10.1126/science.aad5284.
McFarland, M.N., Rines, J., Sullivan, J., and Donaghay, P. (2015). Impact of Phytoplankton Size and Physiology on Particulate Optical Properties Determined with Scanning Flow Cytometry, Mar. Ecol. Prog. Ser., 531, 43-61, doi: 10.3354/meps11325.
Churnside, J.H., Sullivan, J.M., and Twardowski, M.S. (2014). Lidar Extinction-to-backscatter Ratio of the Ocean, Opt. Express, 22(15), 18698-18706, doi: 10.1364/OE.22.018698.
Gilerson, A.A., Stepinski, J., Ibrahim, A.I., You, Y., Sullivan, J.M., Twardowski, M.S., Dierssen, H.M., Russell, B., Cummings, M.E., Brady, P., Ahmed, S.A., and Kattawar, G.W. (2013). Benthic Effects on the Polarization of Light in Shallow Waters, Appl. Opt., 52(36), 8685-8705, doi: 10.1364/AO.52.008685.
Lee, J.H., Churnside, J.H., Marchbanks, R.D., Donaghay, P.L., and Sullivan, J.M. (2013). Oceanographic Lidar Profiles Compared with Estimates from In Situ Optical Measurements, Appl. Opt., 52, 786-794, doi: 10.1364/AO.52.000786.
Talapatra, S., Hong, J., McFarland, M., Nayak, A.R., Zhang, C., Katz, J., Sullivan, J., Twardowski, M., Rines, J., and Donaghay, P. (2013). Characterization of Biophysical Interactions in the Water Column Using In Situ Digital Holography, Mar. Ecol. Prog. Ser., 473, 29-51, doi: 10.3354/meps10049.
Sullivan, J.M., Twardowski, M.S., Zaneveld, J.R.V., and Moore, C.C. (2012). Measuring Optical Backscattering in Water, in Light Scattering Reviews 7 (A.A. Kokhanovsky, ed.), 189-224, doi: 10.1007/978-3-642-21907-8_6.
Gleason, A.C.R., Voss, K.J., Gordon, H.R., Twardowski, M., Sullivan, J., Trees, C., Weidemann, A., Berthon, J.-F., Clark, D., and Lee, Z.-P. (2012). Detailed Validation of the Bidirectional Effect in Various Case I and Case II Waters, Opt. Express, 20(7), 7630-7645, doi: 10.1364/OE.20.007630.
Twardowski, M., Zhang, X., Vagle, S., Sullivan, J., Freeman, S., Czerski, H., You, Y., Bi, L., and Kattawar, G. (2012). The Optical Volume Scattering Function in a Surf Zone Inverted to Derive Sediment and Bubble Particle Subpopulations, J. Geophys. Res., 117(C7), C00H17, doi: 10.1029/2011JC007347.
You, Y., Tonizzo, A., Gilerson, A.A., Cummings, M.E., Brady, P., Sullivan, J.M., Twardowski, M.S., Dierssen, H.M., Ahmed, S.A., and Kattawar, G.W. (2011). Measurements and Simulations of Polarization States of Underwater Light in Clear Oceanic Waters, Appl. Opt., 50(24), 4873-4893, doi: 10.1364/AO.50.004873.
Rines, J.E.B., McFarland, M.N., Donaghay, P.L., and Sullivan, J.M. (2010). Thin Layers and Species-Specific Characterization of the Phytoplankton Community in Monterey Bay, California USA, Cont. Shelf Res., 30(1), 66-80, doi: 10.1016/j.csr.2009.11.001.
Ryan, J.P., McManus, M.A., and Sullivan, J.M. (2010). Interacting Physical, Chemical and Biological Forcing of Phytoplankton Thin-layer Variability in Monterey Bay, California, Cont. Shelf Res., 30(1), 7-16, doi: 10.1016/j.csr.2009.10.017.
Sullivan, J.M. and Twardowski, M.S. (2009). Angular Shape of the Volume Scattering Function in the Backwards Direction, Appl. Opt., 48(35), 6811-6819, doi: 10.1364/AO.48.006811.
Zhang, X., Hu, L., Twardowski, M.S., and Sullivan, J.M. (2009). Scattering by Solutions of Major Sea Salts, Opt. Express, 17(22), 19580-19585, doi: 10.1364/OE.17.019580.
Sullivan, J.M., Donaghay, P.L., and Rines, J.E.B. (2009). Coastal Thin Layer Dynamics: Consequences to Biology and Optics, Cont. Shelf Res., 30(1), 50-65, doi: 10.1016/j.csr.2009.07.009.
McManus, M.A., Kudela, R.M., Silver, M.W., Steward, G.F., Donaghay, P.L., and Sullivan, J.M. (2007). Cryptic Blooms: Are Thin Layers the Missing Connection?, Estuar. Coast., 31(2), 396-401, doi: 10.1007/s12237-007-9025-4.
Sullivan, J.M., Twardowski, M.S., Zaneveld, J.R., Moore, C., Barnard, A., Donaghay, P.L., and Rhoades, B. (2006). Hyperspectral Temperature and Salt Dependencies of Absorption by Water and Heavy Water in the 400-750 nm Spectral Range, Appl. Opt., 45(21), 5294-5309, doi: 10.1364/AO.45.005294.
Sullivan, J.M., Twardowski, M.S., Donaghay, P.L., and Freeman, S. (2005). Using Optical Scattering to Discriminate Particle Types in Coastal Waters, Appl. Opt., 44(9), 1667-1680, doi: 10.1364/AO.44.001667.
Twardowski, M.S., Boss, E., Sullivan, J.M., and Donaghay, P.L. (2004). Modeling Spectral Absorption by Chromophoric Dissolved Organic Matter (CDOM), Mar. Chem., 89(1-4), 69-88, doi: 10.1016/j.marchem.2004.02.008.
Sullivan, J.M., Swift, E., Donaghay, P.L., and Rines, J.E.B. (2003). Small-scale Turbulence Affects the Division Rate and Morphology of Two Red-tide Dinoflagellates, Harmful Algae 2(3), 183-199, doi: 10.1016/S1568-9883(03)00039-8.
Holliday, D.V., Donaghay, P.L., Greenlaw, C.F., McGehee, D.E., McManus, M.M., Sullivan, J.M., and Miksis, J.L. (2003). Advances in Defining Fine- and Micro-scale Pattern in Marine Plankton, Aquat. Living Resour., 16(3), 131-136, doi: 10.1016/S0990-7440(03)00023-8.
Sullivan, J.M. and Swift, E. (2003). Effects of Small-scale Turbulence on the Net Growth Rate and Size of Ten Species of Marine Dinoflagellates, J. Phycol., 39(1), 83-94, doi: 10.1046/j.1529-8817.2003.02094.x.
Alldredge, A.L., Cowles, T.J., MacIntyre, S., Rines, J.E.B., Donaghay, P.L., Greenlaw, C.F., Holliday, D.V., Dekshenieks, M.M., Sullivan, J.M., and Zaneveld, R.V. (2002). Occurrence and Mechanisms of Formation of a Dramatic Thin Layer of Marine Snow in a Shallow Pacific Fjord, Mar. Ecol. Prog. Ser., 233, 1-12, doi: 10.3354/meps233001.
Rines, J.E.B., Donaghay, P.L., Dekshenieks, M., Sullivan, J.M., and Twardowski, M.S. (2002). Thin Layers and Camouflage: Hidden Pseudo-Nitzschia Spp. (Bacillariophyceae) Populations in a Fjord in the San Juan Islands, Washington, U.S.A., Mar. Ecol. Prog. Ser., 225, 123-137 doi: 10.3354/meps225123.
Dekshenieks, M.M., Donaghay, P.L., Sullivan, J.M., Rines, J.E.B., Osborn, T.R., and Twardowski, M.S. (2001). Temporal and Spatial Occurrence of Thin Phytoplankton Layers in Relation to Physical Processes, Mar. Ecol. Prog. Ser., 223, 61-71, doi: 10.3354/meps223061.
Twardowski, M.S., Sullivan, J.M., Donaghay, P.L., and Zaneveld, R.V. (1999). Microscale Quantification of the Absorption by Dissolved and Particulate Material in Coastal Waters with an ac-9, J. Atmos. Ocean. Tech., 16, 691-707, doi: 10.1175/1520-0426(1999)016<0691:MQOTAB>2.0.CO;2.
Sullivan, J.M. and Swift, E. (1995). Photoenhancement of Bioluminescence Capacity in Natural and Laboratory Populations of the Autotrophic Dinoflagellate Ceratium fusus (Ehrenb.) Dujardin, J. Geophys. Res., 100(C4), 6565-6574, doi: 10.1029/94JC01511.
Sullivan, J.M. and Swift, E. (1994). Photoinhibition of Mechanically Stimulable Bioluminescence in the Autotrophic Dinoflagellate Ceratium fusus (Pyrrophyta), J. Phycol., 30(4), 627-633, doi: 10.1111/j.0022-3646.1994.00627.x.